General Overview
Escherichia coli typically resides as a symbiotic bacterium in the mammalian large intestine, benefiting itself as well as the host. However, there are several wellestablished pathotypes of diseasecausing E. coli [1][2]:
 Enteropathogenic (EPEC)
 Attaches to small intestinal wall and produces ‘attaching and effacing lesions’, in which microvilli are destroyed and the bacteria become perched on pedestals on the surface of the epithelial cell. This ability is encoded on the locus of enterocyte effacement (LEE) pathogenicity island.
 Causes an inflammatory response and diarrhea, but seldom in persons older than 2y; it can also be isolated from healthy older persons.
 Primarily found in developing countries.
 Enterohemorrhagic (EHEC)
 This is discussed in more detail in its own chapter.
 Enterotoxigenic (ETEC)
 Attaches to small intestinal wall.
 Produces a heatlabile (LT) and/or heatstable (ST) toxins, both of which cause secretion from the small intestinal wall, leading to mild to severe watery diarrhea. LT is an immunogenic multisubunit protein similar to cholera enterotoxin. ST is a nonimmunogenic polypeptide containing 1819 amino acids.
 Primarily found in developing countries and is a major cause of diarrhea in weaned infants, as well as traveler’s diarrhea.
 Can be shed even by immune asymptomatic individuals.
 Enteroaggregative (EAEC)
 Loosely classified group, some of which may be nonpathogenic.
 Produces a thick biofilm (‘stacked brick’ configuration) in the small or large intestines.
 Thought to cause persistent diarrhea (lasting >14 days).
 Can produce many different secretory toxins and cytotoxins, but not ST or LT.
 Enteroinvasive (EIEC)
 Actually invades the epithelial cells of the large intestine, where it multiplies.
 Usually produces watery diarrhea similar to that of EPEC and ETEC, sometimes inflammatory colitis or dysentery.
 Particularly closely related to Shigella sp. (which are now thought to be subgroups of E. coli); much pathogenesis from EIEC and Shigella sp. is mediated by the pWR100 virulence plasmid.
 Diffusely adherent (DAEC)
 Attaches to the small intestinal wall and induces formation of projections which wrap around the bacterium.
Enterotoxigenic Escherichia coli (ETEC) is the most common type of diarrheagenic E. coli.[3] It may also be the most common cause of childhood diarrhea in the developing world, responsible for approximately 1/7 of diarrheal episodes in children aged less than 1 year and almost 1/4 of diarrheal episodes in 14 year olds.^{[4]} It can also cause severe dehydrating choleralike disease in adults.[3] Diagnosis is complicated since many other Gramnegative bacteria produce similar toxins, so toxins as well as the E. coli bacterium must be tested for in order to yield accurate results.^{[4]}
ETEC can often be detected in apparently healthy people. In developing countries among healthy 011 month olds, and 14 year olds, 11.7% and 7.1%, respectively, are estimated to be colonized with ETEC.^{[4]}
Feeding studies of ETEC or EPEC in healthy volunteers first gave 23g of NaHCO_{3}, which neutralizes stomach acid and reduces the infectious dose.[4] However, it has been suggested that food as a vehicle has a similar acidneutralizing effect, so feeding studies given with NaHCO_{3} may better represent natural foodborne infection.[4] ETEC and EPEC generally have high ID_{50}, and partly as a consequence of this, they do not appear to be transmitted persontoperson; a study of ETECinfected volunteers cohoused with uninfected volunteers did not result in any transmission of infection.[5] Food was all served individually to the volunteers over the course of the experiment, so there was no opportunity for ETEC to spread via that route.[5]
http://www.cdc.gov/ecoli/index.html
Summary of data and models
There are many human feeding studies of various E. coli types and strains, which can be pooled in various ways to yield different dose response models. Many of these have small sample sizes and cannot be used on their own to reliably fit a dose response model. Most datasets for E. coli infections describe high levels of infection resulting from high doses. Lower doses remain to be investigated, and dose response models for infection are therefore uncertain. Another important factor is whether the dose was given with bicarbonate, which would neutralize some stomach acid and possibly increase infectivity.
Haas, Rose, and Gerba (1999) fitted betaPoisson models to several pooled datasets describing the disease response from ETEC, EPEC and EIEC. [6]Among these datasets were the EPEC strains O111[7] and O55, as well as EIEC strains 4608 and 1624[8] with diarrhea as the end point. However, it mixed data from experiments in which bacteria were given with and without bicarbonate.
The best available dataset using infection as a response comes from an experiment (98) with 3 dose levels, feeding EIEC to adult humans.[8]
Powell et al. (2000) pooled 3 human trial datasets[9][10] for EPEC to produce a betaPoisson model and a Weibullgamma model. [11]
Additional pooling analyses for this chapter were conducted on the basis of pathotype (ETEC or EPEC), whether the dose was given with bicarbonate, and the nature of the response (disease or infection), incorporating more data from the literature than the previous two published models. Since some combinations of these factors lacked data, analyses could only be done for ETEC disease (buffered or unbuffered), EPEC disease (buffered), ETEC infection (unbuffered), and EPEC infection (buffered). The pooled datasets for infection contained mostly positive responses, and therefore their behavior at low doses is very uncertain. For the pooled analyses describing disease, datasets were excluded if they contributed significantly (P < 0.05) to the 2 log likelihood of the model given the data.[12] Two experiments examining diarrhea from EIEC were also pooled.[8]
References
 Kaper, J. B., Nataro J. P., & Mobley H. L. (2004). Pathogenic Escherichia coli. Nature Reviews. 2, 123140.
 Nataro, J. P., & Kaper J. B. (1998). Diarrheagenic Escherichia coli. Clinical Microbiology Reviews. 11, 142201.
 Qadri, F., Svennerholm AM., Faruque A. S. G., & Sack R. B. (2005). Enterotoxigenic Escherichia coli in developing countries: epidemiology, microbiology, clinical features, treatment, and prevention. Clinical Microbiology Reviews. 18, 465483.
 Levine, M. M., Caplan E. S., Waterman D., Cash R. A., Hornick R. B., & Snyder M. J. (1977). Diarrhea caused by Escherichia coli that produce only heatstable enterotoxin. Infection and Immunity. 17, 1.
 Levine, M. M., Rennels M. B., Cisneros L., Hughes T. P., Nalin D. R., & Young C. R. (1980). Lack of PersontoPerson Transmission of Enterotoxigenic Escherichia Coli Despite Close Contact. American Journal of Epidemiology. 111, 3.
 Haas, C. N., Rose J. B., & Gerba C. P. (1999). Quantitative Microbial Risk Assessment.
 Feeguson, W. W., & June E. C. (1952). Experiments on Feeding Adult Volunteers with Escherichia Coli 111, B4, a Coliform Organism Associated with Infant Diarrhea. American Journal of Epidemiology. 55, 2.
 DuPont, H. L., Formal S. B., Hornick R. B., Snyder M. J., Libonati J. P., Sheahan D. G., et al. (1971). Pathogenesis of Escherichia coli diarrhea. The New England journal of medicine. 285, 1.
 Levine, M. M., Bergquist E. J., Nalin D. R., Waterman D. H., Hornick R. B., Young C. R., et al. (1978). Escherichia coli strains that cause diarrhoea but do not produce heatlabile or heatstable enterotoxins and are noninvasive. Lancet.. 1, 8074.
 Bieber, D., Ramer S. W., Cy W., Murray W. J., Tobe T., Fernandez R., et al. (1998). Type IV Pili, Transient Bacterial Aggregates, and Virulence of Enteropathogenic Escherichia coli. Science.. 280, 5372.
 Powell, M. R. (2000). Doseresponse envelope for Escherichia coli O157:H7. Quantitative Microbiology. 2, 141163.
 Haas, C. N., Rose J. B., & Gerba C. P. (1999). Quantitative microbial risk assessment.
ID  # of Doses  Agent Strain  Dose Units  Host type  Μodel  Optimized parameters  Response type  Reference 

142, 143, 144, 145, 147, 151, 161, 162, 163, 164, 168, 169, 170, 172  19  ETEC B7A  CFU  human  betaPoisson 
a = 7.54E02 LD_{50}/ID_{50} = 1.7E+06 N_{50} = 1.7E+06 
diarrhea  Immune response, ciprofloxacin activity, and gender differences after human experimental challenge by two strains of enterotoxigenic Escherichia coli." Infection and immunity. 75 (2007): 1.  "
153, 157, 159, 214, 216, 217  11  EPEC E2348/69 (O127:H6)  CFU  human  betaPoisson 
a = 1.62E01 LD_{50}/ID_{50} = 9.98E+07 N_{50} = 9.98E+07 
diarrhea  Role of EspB in Experimental Human Enteropathogenic Escherichia coli Infection." Infection and Immunity. 68 (2000): 6.  "
154, 156, 158, 160, 219, 220, 221  13  EPEC E2348/69 (O127:H6)  CFU  human  exponential 
k = 1.95E06 LD_{50}/ID_{50} = 3.56E+05 
shedding in feces  Role of EspB in Experimental Human Enteropathogenic Escherichia coli Infection." Infection and Immunity. 68 (2000): 6.  "
165  3  ETEC 2144 (ST)  CFU  human  betaPoisson 
a = 2.5E01 LD_{50}/ID_{50} = 9.1E+07 N_{50} = 9.1E+07 
diarrhea or vomiting  Diarrhea caused by Escherichia coli that produce only heatstable enterotoxin." Infection and Immunity. 17 (1977): 1.  "
214, 216, 217  8  EPEC B1718 (serotype O11:NM)  CFU  human  betaPoisson 
a = 2.21E01 LD_{50}/ID_{50} = 6.85E+07 N_{50} = 6.85E+07 
diarrhea  Type IV Pili, Transient Bacterial Aggregates, and Virulence of Enteropathogenic Escherichia coli." Science.. 280 (1998): 5372.  "
38, 39, 40, 42, 99, 144  15  ETEC B7A  CFU  human  betaPoisson 
a = 1.78E01 LD_{50}/ID_{50} = 8.6E+07 N_{50} = 8.6E+07 
mild to severe diarrhea  Pathogenesis of Escherichia coli diarrhea." The New England journal of medicine. 285 (1971): 1.  "
38, 42, 99, 165  11  ETEC B7A  CFU  human  betaPoisson 
a = 2.06E01 LD_{50}/ID_{50} = 1.28E+08 N_{50} = 1.28E+08 
mild to severe diarrhea  Pathogenesis of Escherichia coli diarrhea." The New England journal of medicine. 285 (1971): 1.  "
39  3  EIEC 4608  CFU  human  exponential 
k = 9.7E09 LD_{50}/ID_{50} = 7.14E+07 
mild to severe diarrhea  Pathogenesis of Escherichia coli diarrhea." The New England journal of medicine. 285 (1971): 1.  "
39, 40  6  EIEC 4608  CFU  human  exponential 
k = 1.07E08 LD_{50}/ID_{50} = 6.5E+07 
mild to severe diarrhea  Pathogenesis of Escherichia coli diarrhea." The New England journal of medicine. 285 (1971): 1.  "
40  3  EIEC 1624  CFU  human  exponential 
k = 1.22E08 LD_{50}/ID_{50} = 5.7E+07 
mild to severe diarrhea  Pathogenesis of Escherichia coli diarrhea." The New England journal of medicine. 285 (1971): 1.  "
42  4  ETEC O55 (in paper as “type 55, B5”)  CFU  human  betaPoisson 
a = 8.7E02 LD_{50}/ID_{50} = 2.05E+05 N_{50} = 2.05E+05 
slight to severe illness  Experiments in feeding adult volunteers with Escherichia coli 55, B5, a coliform organism associated with infant diarrhea." American journal of hygiene. 57 (1953): 2.  "
43  4  ETEC O111 (in paper as "E. coli 111, B4")  CFU  human  betaPoisson 
a = 2.63E01 LD_{50}/ID_{50} = 3.56E+06 N_{50} = 3.56E+06 
slight to severe illness  Experiments on Feeding Adult Volunteers with Escherichia Coli 111, B4, a Coliform Organism Associated with Infant Diarrhea." American Journal of Epidemiology. 55 (1952): 2.  "
96, 100, 166  7  ETEC B7A  CFU  human  betaPoisson 
a = 3.75E01 LD_{50}/ID_{50} = 1.78E+05 N_{50} = 1.78E+05 
positive stool isolation  
98  3  EIEC 1624  CFU  human  betaPoisson 
a = 1.55E01 LD_{50}/ID_{50} = 2.11E+06 N_{50} = 2.11E+06 
positive stool isolation  Pathogenesis of Escherichia coli diarrhea." The New England journal of medicine. 285 (1971): 1.  "
 Optimization Output for Exp. 142, 143, 144, 145, 147, 151, 161, 162, 163, 164, 168, 169, 170, 172
 Optimization Output for Exp. 153, 157, 159, 214, 216, 217
 Optimization Output for Exp. 154, 156, 158, 160, 219, 220, 221
 Optimization Output for Exp. 165
 Optimization Output for Exp. 214, 216, 217
 Optimization Output for Exp. 38, 39, 40, 42, 99, 144
 Optimization Output for Exp. 38, 42, 99, 165
 Optimization Output for Exp. 39
 Optimization Output for Exp. 39, 40
 Optimization Output for Exp. 40
 Optimization Output for Exp. 42
 Optimization Output for Exp. 43
 Optimization Output for Exp. 96, 100, 166
 Optimization Output for Exp. 98
LD_{50}/ID_{50} = 1.7E+06
N_{50} = 1.7E+06



Parameter scatter plot for beta Poisson model ellipses signify the 0.9, 0.95 and 0.99 confidence of the parameters.
beta Poisson model plot, with confidence bounds around optimized model
LD_{50}/ID_{50} = 9.98E+07
N_{50} = 9.98E+07



Parameter scatter plot for beta Poisson model ellipses signify the 0.9, 0.95 and 0.99 confidence of the parameters.
beta Poisson model plot, with confidence bounds around optimized model
k = 1.95E06
LD_{50}/ID_{50} = 3.56E+05



Parameter histogram for exponential model (uncertainty of the parameter)
Exponential model plot, with confidence bounds around optimized model
LD_{50}/ID_{50} = 9.1E+07
N_{50} = 9.1E+07



Parameter scatter plot for beta Poisson model ellipses signify the 0.9, 0.95 and 0.99 confidence of the parameters.
beta Poisson model plot, with confidence bounds around optimized model
References
 Levine, M. M., Caplan E. S., Waterman D., Cash R. A., Hornick R. B., & Snyder M. J. (1977). Diarrhea caused by Escherichia coli that produce only heatstable enterotoxin. Infection and Immunity. 17, 1.
LD_{50}/ID_{50} = 6.85E+07
N_{50} = 6.85E+07



Parameter scatter plot for beta Poisson model ellipses signify the 0.9, 0.95 and 0.99 confidence of the parameters.
beta Poisson model plot, with confidence bounds around optimized model
LD_{50}/ID_{50} = 8.6E+07
N_{50} = 8.6E+07



Parameter scatter plot for beta Poisson model ellipses signify the 0.9, 0.95 and 0.99 confidence of the parameters.
beta Poisson model plot, with confidence bounds around optimized model
LD_{50}/ID_{50} = 1.28E+08
N_{50} = 1.28E+08



Parameter scatter plot for beta Poisson model ellipses signify the 0.9, 0.95 and 0.99 confidence of the parameters.
beta Poisson model plot, with confidence bounds around optimized model
k = 9.7E09
LD_{50}/ID_{50} = 7.14E+07



Parameter histogram for exponential model (uncertainty of the parameter)
Exponential model plot, with confidence bounds around optimized model
References
 DuPont, H. L., Formal S. B., Hornick R. B., Snyder M. J., Libonati J. P., Sheahan D. G., et al. (1971). Pathogenesis of Escherichia coli diarrhea. The New England journal of medicine. 285, 1.
k = 1.07E08
LD_{50}/ID_{50} = 6.5E+07



Parameter histogram for exponential model (uncertainty of the parameter)
Exponential model plot, with confidence bounds around optimized model
k = 1.22E08
LD_{50}/ID_{50} = 5.7E+07



Parameter histogram for exponential model (uncertainty of the parameter)
Exponential model plot, with confidence bounds around optimized model
References
 DuPont, H. L., Formal S. B., Hornick R. B., Snyder M. J., Libonati J. P., Sheahan D. G., et al. (1971). Pathogenesis of Escherichia coli diarrhea. The New England journal of medicine. 285, 1.
LD_{50}/ID_{50} = 2.05E+05
N_{50} = 2.05E+05



Parameter scatter plot for beta Poisson model ellipses signify the 0.9, 0.95 and 0.99 confidence of the parameters.
beta Poisson model plot, with confidence bounds around optimized model
References
 June, R. C., Ferguson W. W., & Worfel M. T. (1953). Experiments in feeding adult volunteers with Escherichia coli 55, B5, a coliform organism associated with infant diarrhea. American journal of hygiene. 57, 2.
LD_{50}/ID_{50} = 3.56E+06
N_{50} = 3.56E+06



beta Poisson model plot, with confidence bounds around optimized model
Parameter scatter plot for beta Poisson model ellipses signify the 0.9, 0.95 and 0.99 confidence of the parameters.
References
 Feeguson, W. W., & June E. C. (1952). Experiments on Feeding Adult Volunteers with Escherichia Coli 111, B4, a Coliform Organism Associated with Infant Diarrhea. American Journal of Epidemiology. 55, 2.
LD_{50}/ID_{50} = 1.78E+05
N_{50} = 1.78E+05



Parameter scatter plot for beta Poisson model ellipses signify the 0.9, 0.95 and 0.99 confidence of the parameters.
beta Poisson model plot, with confidence bounds around optimized model
LD_{50}/ID_{50} = 2.11E+06
N_{50} = 2.11E+06



Parameter scatter plot for beta Poisson model ellipses signify the 0.9, 0.95 and 0.99 confidence of the parameters.
beta Poisson model plot, with confidence bounds around optimized mode
References
 DuPont, H. L., Formal S. B., Hornick R. B., Snyder M. J., Libonati J. P., Sheahan D. G., et al. (1971). Pathogenesis of Escherichia coli diarrhea. The New England journal of medicine. 285, 1.