Description
mice (5day old) /  Pseudomonas aeruginosa 
Dose Dead Survived Total
2.5 0 13 13
25 0 14 14
250 0 12 12
2500 4 13 17
25000 15 0 15
250000 17 0 17

 

Goodness of fit and model selection
Model Deviance Δ Degrees 
of freedom		 χ20.95,1 
p-value 		χ20.95,m-k 
p-value
Exponential

2.17

-0.000196 

 5 3.84 
1 		11.1 
0.825
Beta Poisson

2.17

 4 9.49 
0.704
Exponential is preferred to beta-Poisson; cannot reject good fit for exponential.

 

Optimized k parameter for the exponential model, from 10000 bootstrap iterations
Parameter MLE estimate Percentiles
0.5% 2.5% 5% 95% 97.5% 99.5%
k 1.39E-04 8.87E-05 9.90E-05 9.90E-05 2.05E-04 2.36E-04 2.73E-04
ID50/LD50/ETC* 4.98E+03 2.54E+03 2.94E+03 3.38E+03 7.00E+03 7.00E+03 7.82E+03
*Not a parameter of the exponential model; however, it facilitates comparison with other models.

 

Parameter histogram for exponential model (uncertainty of the parameter)

Exponential model plot, with confidence bounds around optimized model

# of Doses
6.00
Μodel
exponential
LD50/ID50
4.98E+03
Dose Units
CFU
Response
death(after day 21)
Exposure Route
injected in eyelids
Contains Preferred Model
k
1.39E-04
Agent Strain
ATCC 19660
Experiment ID
282
Host type
Swiss webster mice (5day old)
Description
mice (5day old) /  Pseudomonas aeruginosa 
Dose Dead Survived Total
2.5 0 13 13
25 0 14 14
250 0 12 12
2500 4 13 17
25000 13 2 15
250000 17 0 17

 

Goodness of fit and model selection
Model Deviance Δ Degrees 
of freedom		 χ20.95,1 
p-value 		χ20.95,m-k 
p-value
Exponential

0.802

 0.0885 5 3.84 
0.766 		11.1 
0.977
Beta Poisson

0.713

 4 9.49 
0.95
Exponential is preferred to beta-Poisson; cannot reject good fit for exponential.

 

Optimized k parameter for the exponential model, from 10000 bootstrap iterations
Parameter MLE estimate Percentiles
0.5% 2.5% 5% 95% 97.5% 99.5%
k 8.52E-05 4.21E-05 4.99E-05 5.50E-05 1.53E-04 1.57E-04 2.05E-04
ID50/LD50/ETC* 8.13E+03 3.38E+03 4.40E+03 4.54E+03 1.26E+04 1.39E+04 1.65E+04
*Not a parameter of the exponential model; however, it facilitates comparison with other models.

 

Parameter histogram for exponential model (uncertainty of the parameter)

Exponential model plot, with confidence bounds around optimized model

# of Doses
6.00
Μodel
exponential
LD50/ID50
8.13E+03
Dose Units
CFU
Response
death
Exposure Route
injected in eyelids
Contains Preferred Model
k
8.52E-05
Agent Strain
ATCC 19660
Experiment ID
281
Host type
Swiss webster mice (5day old)
Description

mice (5day old, day 1-21 pooled) /  Pseudomonas aeruginosa 
Dose Dead Survived Total
2.5 0 13 13
2.5 0 13 13
25 0 14 14
25 0 14 14
250 0 12 12
250 0 12 12
2500 4 13 17
2500 4 13 17
25000 13 2 15
25000 15 0 15
250000 17 0 17
250000 17 0 17

 

Goodness of fit and model selection
Model Deviance Δ Degrees 
of freedom		 χ20.95,1 
p-value 		χ20.95,m-k 
p-value
Exponential

4.36 

 -0.000549

   3.84 
1 		19.7
0.958
Beta Poisson

4.36

 10 18.3 
0.93
Exponential is preferred to beta-Poisson; cannot reject good fit for exponential.

 

Optimized k parameter for the exponential model, from 500 bootstrap iterations
Parameter MLE estimate Percentiles
0.5% 2.5% 5% 95% 97.5% 99.5%
k 1.05E-04 6.84E-05 7.49E-05 7.84E-05 1.48E-04 1.57E-04 1.73E-04
ID50/LD50/ETC* 6.61E+03 4.01E+03 4.40E+03 4.68E+03 8.84E+03 9.26E+03 1.01E+04
*Not a parameter of the exponential model; however, it facilitates comparison with other models.

 

 

 

Parameter histogram for exponential model (uncertainty of the parameter)

Exponential model plot, with confidence bounds around optimized model

# of Doses
12.00
Μodel
exponential
LD50/ID50
6.61E+03
Dose Units
CFU
Response
death
Exposure Route
injected in eyelids
Contains Preferred Model
k
1.05E-04
Agent Strain
ATCC 19660
Experiment ID
281,282 (pooled)
Host type
Swiss webster mice (5day old)
Subscribe to Swiss webster mice (5day old)